BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013B09SP1|AL426477
(809 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1394 1598 0.0
>3x_Contig1394
Length = 5721
Score = 1598 bits (805), Expect = 0.0
Identities = 807/809 (99%)
Strand = Plus / Plus
Query: 1 aattgactgtwaatggctccaatcatatgtttcagtcatgtttgatagtattttcaagaa 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3881 aattgactgtaaatggctccaatcatatgtttcagtcatgtttgatagtattttcaagaa 3940
Query: 61 gacgttgacgttggcgttggctttgcaattgacgtttattcaaaacggaatacgccggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3941 gacgttgacgttggcgttggctttgcaattgacgtttattcaaaacggaatacgccggat 4000
Query: 121 acagtttgaatttcttgcgtaatccccattctagcaatgcgtatggaatcagtagcatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4001 acagtttgaatttcttgcgtaatccccattctagcaatgcgtatggaatcagtagcatta 4060
Query: 181 accatttcactaccgtggccatcgttccccggtatatatccaccgggtcaatgctgccgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4061 accatttcactaccgtggccatcgttccccggtatatatccaccgggtcaatgctgccgt 4120
Query: 241 tttcgatatcattcaccgtttctcttgcgtaatcagctggtgacatcggttgattcttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4121 tttcgatatcattcaccgtttctcttgcgtaatcagctggtgacatcggttgattcttct 4180
Query: 301 ctgacatcttcttacgggtttcaacggctttgataccctccgggaagttgaagatactac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4181 ctgacatcttcttacgggtttcaacggctttgataccctccgggaagttgaagatactac 4240
Query: 361 cttctggtaatgtcttcttatcagcgatgtctgtggctacacctcctgtaatcatgttaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4241 cttctggtaatgtcttcttatcagcgatgtctgtggctacacctcctgtaatcatgttaa 4300
Query: 421 tgacacgtacgcccaaaggacctaattctccgtgtaacacccgagcgtattgatgaatcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4301 tgacacgtacgcccaaaggacctaattctccgtgtaacacccgagcgtattgatgaatcg 4360
Query: 481 cagcctttgatgcgctgtacactgctccaaacggaaatggacatatcccagctaatgacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4361 cagcctttgatgcgctgtacactgctccaaacggaaatggacatatcccagctaatgacc 4420
Query: 541 cagtgaagacgattgtycccttagcgtttatgattaatggtgcgaattcacgacatgagt 600
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4421 cagtgaagacgattgtccccttagcgtttatgattaatggtgcgaattcacgacatgagt 4480
Query: 601 tgatgggtccataaacgtttactctgaatgtattatcgatgatttcttcgctcacgtcta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4481 tgatgggtccataaacgtttactctgaatgtattatcgatgatttcttcgctcacgtcta 4540
Query: 661 ttgcgggcagagagcagctttggccagcgttattatataatagatgtagcttctgatctg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4541 ttgcgggcagagagcagctttggccagcgttattatataatagatgtagcttctgatctg 4600
Query: 721 gtaattcttgctccaacttcaacttcaactgggtgatatcattctgattcgaaacatcaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4601 gtaattcttgctccaacttcaacttcaactgggtgatatcattctgattcgaaacatcaa 4660
Query: 781 gtttcctagggatgcatctatctccaaac 809
|||||||||||||||||||||||||||||
Sbjct: 4661 gtttcctagggatgcatctatctccaaac 4689
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4988
Number of Sequences: 1807
Number of extensions: 4988
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 809
length of database: 10,358,551
effective HSP length: 16
effective length of query: 793
effective length of database: 10,329,639
effective search space: 8191403727
effective search space used: 8191403727
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)